CDS

Accession Number TCMCG057C02299
gbkey CDS
Protein Id XP_018436788.1
Location join(10709560..10709725,10709817..10709893,10709992..10710114,10710725..10710829,10710950..10711022,10711094..10711165,10711253..10711448,10711558..10711681,10711778..10711843)
Gene LOC108809148
GeneID 108809148
Organism Raphanus sativus

Protein

Length 333aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018581286.1
Definition PREDICTED: spermidine synthase 1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the spermidine spermine synthase family
KEGG_TC -
KEGG_Module M00034        [VIEW IN KEGG]
M00133        [VIEW IN KEGG]
KEGG_Reaction R01153        [VIEW IN KEGG]
R01920        [VIEW IN KEGG]
R02869        [VIEW IN KEGG]
R08359        [VIEW IN KEGG]
KEGG_rclass RC00003        [VIEW IN KEGG]
RC00021        [VIEW IN KEGG]
RC00053        [VIEW IN KEGG]
RC00060        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00797        [VIEW IN KEGG]
ko:K05353        [VIEW IN KEGG]
EC 2.1.1.53        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00270        [VIEW IN KEGG]
ko00330        [VIEW IN KEGG]
ko00410        [VIEW IN KEGG]
ko00480        [VIEW IN KEGG]
ko00960        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00270        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map00410        [VIEW IN KEGG]
map00480        [VIEW IN KEGG]
map00960        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004766        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006595        [VIEW IN EMBL-EBI]
GO:0006596        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCCAAAGAAGCCTCCGCCACCGATCTGAAGCGTCCGAGAGAAGAGGAGGATAACGCTGCCGCCTCCATGGAGACAGAGAACGGAGATCAGACAAAGGAGCCTGCTTGTTTCTCCTCCGTGATTCCTGGCTGGTTCTCCGAGATGAGTCCCATGTGGCCAGGAGAGGCACACTCTTTGAAGGTTGAGAAGGTTTTGTTTCAAGGGAAATCAGATTATCAGGATGTCATTGTTTTCCAGTCTGCGACATATGGAAAAGTGTTGGTTTTGGATGGAGTCATCCAACTCACGGAGAGAGACGAGTGCGCTTATCAGGAGATGATCACTCATCTTCCTTTGTGCTCTATCCCTAACCCAAAGAAGGTCTTGGTCATTGGAGGAGGAGATGGAGGTGTCCTGCGGGAGGTTGCACGCCATGCTTCTGTTGAGCATATTGATATGTGTGAGATTGATAAAATGGTGGTCGATGTATCTAAGCAGTTTTTCCCTAATGTAGCAATTGGATTCGAGGATCCTCGCGTTAACCTCGTCATTGGCGATGGTGTTGCTTTCTTGAAGAATGCTGCTGAAGGATCATATGATGCAGTTATTGTTGACTCATCAGATCCAATTGGTCCTGCAAAGGAGCTGTTTGAGAAACCCTTCTTCCAATCTGTGGCGAGAGCTCTTAGACCTGGTGGAGTTGTGTGCACTCAGGCTGAAAGCTTGTGGCTTCACATGGACATCATCGAAGACATTGTTTCCAATTGCCGTGAGATCTTCAAGGGCTCTGTGAACTACGCGTGGACCAGTGTTCCAACATACCCGAGTGGGGTGATCGGATTCATGCTCTGTTCAACTGAAGGGCCTGACGTTGACTTCAAGAACCCTGTGAACCCGATTGATGACAGCTCCAGCAAATCAAAGGGACCCTTAAAGTTTTACAACGCTGAGATTCATTCAGCTGCGTTCTGCTTGCCTTCTTTCGCCAAGAAGGTAATAGAGTCAAAAGCCAATTGA
Protein:  
MDAKEASATDLKRPREEEDNAAASMETENGDQTKEPACFSSVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASVEHIDMCEIDKMVVDVSKQFFPNVAIGFEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKNPVNPIDDSSSKSKGPLKFYNAEIHSAAFCLPSFAKKVIESKAN